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Functional analysis of naturally occurring DCLRE1C mutations and correlation with the clinical phenotype of ARTEMIS deficiency - 03/07/15

Doi : 10.1016/j.jaci.2015.03.005 
Kerstin Felgentreff, MD a, Yu Nee Lee, PhD a, Francesco Frugoni, PhD a, Likun Du, PhD a, Mirjam van der Burg, PhD b, Silvia Giliani, PhD c, Ilhan Tezcan, MD d, Ismail Reisli, MD e, Ester Mejstrikova, MD f, Jean-Pierre de Villartay, PhD g, Barry P. Sleckman, MD, PhD h, John Manis, MD, PhD i, Luigi D. Notarangelo, MD a, j,
a Division of Immunology, Boston Children's Hospital, Harvard Medical School, Boston, Mass 
i Department of Transfusion Medicine, Boston Children's Hospital, Harvard Medical School, Boston, Mass 
b Department of Immunology, Erasmus Medical Center, Rotterdam, The Netherlands 
c Angelo Nocivelli Institute for Molecular Medicine, Department of Pediatrics, University of Brescia, Brescia, Italy 
d Immunology Department, Ihsan Dogramaci Children's Hospital, Hacettepe University Medical School, Sıhhiye, Ankara, Turkey 
e Department of Pediatric Immunology and Allergy, Necmettin Erbakan University, Meram Medical Faculty, Konya, Turkey 
f CLIP-Childhood Leukemia Investigation Prague, Department of Pediatric Hematology and Oncology, 2nd Faculty of Medicine and University Hospital Motol, Charles University, Prague, Czech Republic 
g Laboratory of “Genome Dynamics in the Immune System”, INSERM UMR1163, Université Paris Descartes Sorbonne Paris Cité, Institut Imagine, Paris, France 
h Department of Pathology and Immunology, Washington University School of Medicine, St Louis, Mo 
j Harvard Stem Cell Institute, Harvard University, Boston, Mass 

Corresponding author: Luigi D. Notarangelo, MD, Division of Immunology, Children's Hospital Boston, Manton Centre for Orphan Disease Research, Harvard Stem Cell Institute, Harvard University, Karp Research Building, Rm 12017, 1 Blackfan Circle, Boston, MA 02115.

Abstract

Background

The endonuclease ARTEMIS, which is encoded by the DCLRE1C gene, is a component of the nonhomologous end-joining pathway and participates in hairpin opening during the V(D)J recombination process and repair of a subset of DNA double-strand breaks. Patients with ARTEMIS deficiency usually present with severe combined immunodeficiency (SCID) and cellular radiosensitivity, but hypomorphic mutations can cause milder phenotypes (leaky SCID).

Objective

We sought to correlate the functional effect of human DCLRE1C mutations on phenotypic presentation in patients with ARTEMIS deficiency.

Methods

We studied the recombination and DNA repair activity of 41 human DCLRE1C mutations in Dclre1c−/− v-abl kinase–transformed pro-B cells retrovirally engineered with a construct that allows quantification of recombination activity by means of flow cytometry. For assessment of DNA repair efficacy, resolution of γH2AX accumulation was studied after ionizing radiation.

Results

Low or absent activity was detected for mutations causing a typical SCID phenotype. Most of the patients with leaky SCID were compound heterozygous for 1 loss-of-function and 1 hypomorphic allele, with significant residual levels of recombination and DNA repair activity. Deletions disrupting the C-terminus result in truncated but partially functional proteins and are often associated with leaky SCID. Overexpression of hypomorphic mutants might improve the functional defect.

Conclusions

Correlation between the nature and location of DCLRE1C mutations, functional activity, and the clinical phenotype has been observed. Hypomorphic variants that have been reported in the general population can be disease causing if combined in trans with a loss-of-function allele. Therapeutic strategies aimed at inducing overexpression of hypomorphic alleles might be beneficial.

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Key words : V(D)J recombination, nonhomologous end-joining, DNA repair, ARTEMIS deficiency, DCLRE1C mutations, severe combined immunodeficiency

Abbreviations used : A-MuLV, ExAC, GFP, IR, LOF, MFI, NHEJ, OS, RAG, RSS, SCID, WT


Plan


 Supported in part by grants P01 AI076210-05 and R01AI00887 from the National Institute of Allergy and Infectious Diseases/National Institutes of Health (to L.D.N.) and March of Dimes grant 1-FY13-500 (to L.D.N.). K.F. received funding from the German Research Foundation (FE 1253/1-1). The JpdeV laboratory is partly funded by Ligue Nationale contre le Cancer (Equipe Labellisée La LIGUE). E.M. is supported by MZCR 00064203 and CZ.2.16/3.1.00/21540.
 Disclosure of potential conflict of interest: K. Felgentreff has received funding from the German Research Foundation (DFG). M. van der Burg's institution has received an Innovational Research Incentives Scheme Vidi (ZonMw) grant (no. 91712323). L. D. Notarangelo is employed by Boston Children's Hospital; has received compensation for board membership from the NIAID and Meyer Children's Hospital, as well as for his role as an Associate Editor at the Journal of Allergy of Clinical Immunology, Journal of Clinical Immunology, and Clinical Immunology; has received grants from the March of Dimes (grant no. 1-FY13-500); and receives royalties from UpToDate. The rest of the authors declare that they have no relevant conflicts of interest.


© 2015  American Academy of Allergy, Asthma & Immunology. Publié par Elsevier Masson SAS. Tous droits réservés.
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